dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01123
Location and strand information: 6339 - 9479 (-)
Family: 1.B.14.6.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01124
Location and strand information: 9509 - 13108 (-)
Family: HTH_AraC
Protein type: TF
Protein description: Sensor histidine kinase RcsC

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01125
Location and strand information: 13233 - 13787 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01126
Location and strand information: 14257 - 15903 (+)
Family: GH78
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.8591
Protein molecular weight: 62388.03
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01128
Location and strand information: 16142 - 16231 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01129
Location and strand information: 16368 - 17744 (-)
Family: 2.A.6.2.44
Protein type: TC
Protein description: Outer membrane protein OprM

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01130
Location and strand information: 17751 - 20864 (-)
Family: 2.A.6.2.22
Protein type: TC
Protein description: Efflux pump membrane transporter BepE

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01131
Location and strand information: 20878 - 22092 (-)
Family: 2.A.6.2.19
Protein type: TC
Protein description: Efflux pump periplasmic linker BepF

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01132
Location and strand information: 22489 - 23199 (+)
Family: GT26
Protein type: CAZyme
Protein description: UDP-N-acetyl-D-mannosaminuronic acid transferase
Protein isoelectric point: 9.9847
Protein molecular weight: 26789.92
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000002875_18|CGC1
Gene ID: MGYG000002875_01133
Location and strand information: 23202 - 24407 (+)
Family: GT0
Protein type: CAZyme
Protein description: UDP-N-acetylglucosamine 2-epimerase
Protein isoelectric point: 5.1358
Protein molecular weight: 44450.71
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000002875_01123	hypothetical protein	TC	6339	9479	-	1.B.14.6.1
MGYG000002875_01124	Sensor histidine kinase RcsC	TF	9509	13108	-	HTH_AraC
MGYG000002875_01125	hypothetical protein	null	13233	13787	-	No domain
MGYG000002875_01126	hypothetical protein	CAZyme	14257	15903	+	GH78
MGYG000002875_01128	hypothetical protein	null	16142	16231	-	No domain
MGYG000002875_01129	Outer membrane protein OprM	TC	16368	17744	-	2.A.6.2.44
MGYG000002875_01130	Efflux pump membrane transporter BepE	TC	17751	20864	-	2.A.6.2.22
MGYG000002875_01131	Efflux pump periplasmic linker BepF	TC	20878	22092	-	2.A.6.2.19
MGYG000002875_01132	UDP-N-acetyl-D-mannosaminuronic acid transferase	CAZyme	22489	23199	+	GT26
MGYG000002875_01133	UDP-N-acetylglucosamine 2-epimerase	CAZyme	23202	24407	+	GT0
Protein ID	Protein Name	Type	Start	End	Strand	Signature